Here is a list of all files with brief descriptions:

[detail level 123456]

docs
▼ src
▼ polyfem
► assembler
AMIPSEnergy.cpp
AMIPSEnergy.hpp
Assembler.cpp
Assembler.hpp
AssemblerData.hpp
AssemblerUtils.cpp
AssemblerUtils.hpp
AssemblyValsCache.cpp
AssemblyValsCache.hpp
AssemblyValues.hpp
Bilaplacian.cpp
Bilaplacian.hpp
Electrostatics.cpp
Electrostatics.hpp
ElementAssemblyValues.cpp
ElementAssemblyValues.hpp
FixedCorotational.cpp
FixedCorotational.hpp
GenericElastic.cpp
GenericElastic.hpp
GenericProblem.cpp
GenericProblem.hpp
Helmholtz.cpp
Helmholtz.hpp
HookeLinearElasticity.cpp
HookeLinearElasticity.hpp
IncompressibleLinElast.cpp
IncompressibleLinElast.hpp
Laplacian.cpp
Laplacian.hpp
LinearElasticity.cpp
LinearElasticity.hpp
MacroStrain.hpp
Mass.cpp
Mass.hpp
MassMatrixAssembler.cpp
MassMatrixAssembler.hpp
MatParams.cpp
MatParams.hpp
MooneyRivlin3ParamElasticity.cpp
MooneyRivlin3ParamElasticity.hpp
MooneyRivlin3ParamSymbolic.cpp
MooneyRivlin3ParamSymbolic.hpp
MooneyRivlinElasticity.cpp
MooneyRivlinElasticity.hpp
MultiModel.cpp
MultiModel.hpp
NavierStokes.cpp
NavierStokes.hpp
NeoHookeanElasticity.cpp
NeoHookeanElasticity.hpp
NeoHookeanElasticityAutodiff.cpp
NeoHookeanElasticityAutodiff.hpp
OgdenElasticity.cpp
OgdenElasticity.hpp
OgdenElasticity.tpp
PeriodicBoundary.cpp
PeriodicBoundary.hpp
PressureAssembler.cpp
PressureAssembler.hpp
Problem.cpp
Problem.hpp
RhsAssembler.cpp
RhsAssembler.hpp
SaintVenantElasticity.cpp
SaintVenantElasticity.hpp
Stokes.cpp
Stokes.hpp
ViscousDamping.cpp
ViscousDamping.hpp
► autogen
► quadrature
tetrahedron.py
triangle.py
auto_eigs.cpp
auto_eigs.hpp
auto_elasticity_rhs.cpp
auto_elasticity_rhs.hpp
auto_mooney_rivlin_gradient_hessian.cpp
auto_mooney_rivlin_gradient_hessian.hpp
auto_p_bases.cpp
auto_p_bases.hpp
auto_q_bases.hpp
auto_q_bases_2d_grad.cpp
auto_q_bases_2d_grad.hpp
auto_q_bases_2d_nodes.cpp
auto_q_bases_2d_nodes.hpp
auto_q_bases_2d_val.cpp
auto_q_bases_2d_val.hpp
auto_q_bases_3d_grad.cpp
auto_q_bases_3d_grad.hpp
auto_q_bases_3d_grad_-2.cpp
auto_q_bases_3d_grad_0.cpp
auto_q_bases_3d_grad_1.cpp
auto_q_bases_3d_grad_2.cpp
auto_q_bases_3d_grad_3.cpp
auto_q_bases_3d_nodes.cpp
auto_q_bases_3d_nodes.hpp
auto_q_bases_3d_val.cpp
auto_q_bases_3d_val.hpp
auto_tetrahedron.ipp
auto_tetrahedron_corner.ipp
auto_triangle.ipp
auto_triangle_corner.ipp
eigs.py
elasticity_rhs.py
generate_mooney_rivlin.py
generate_rotation_mtx.py
p_bases.py
p_n_bases.cpp
p_n_bases.hpp
pretty_print.py
q_bases.py
► basis
► barycentric
BarycentricBasis2d.cpp
BarycentricBasis2d.hpp
MVPolygonalBasis2d.cpp
MVPolygonalBasis2d.hpp
WSPolygonalBasis2d.cpp
WSPolygonalBasis2d.hpp
► function
QuadraticBSpline.cpp
QuadraticBSpline.hpp
QuadraticBSpline2d.cpp
QuadraticBSpline2d.hpp
QuadraticBSpline3d.cpp
QuadraticBSpline3d.hpp
RBFWithLinear.cpp
RBFWithLinear.hpp
RBFWithQuadratic.cpp
RBFWithQuadratic.hpp
RBFWithQuadraticLagrange.cpp
RBFWithQuadraticLagrange.hpp
Basis.cpp
Basis.hpp
ElementBases.cpp
ElementBases.hpp
InterfaceData.hpp
LagrangeBasis2d.cpp
LagrangeBasis2d.hpp
LagrangeBasis3d.cpp
LagrangeBasis3d.hpp
PolygonalBasis2d.cpp
PolygonalBasis2d.hpp
PolygonalBasis3d.cpp
PolygonalBasis3d.hpp
SplineBasis2d.cpp
SplineBasis2d.hpp
SplineBasis3d.cpp
SplineBasis3d.hpp
► io
Evaluator.cpp
Evaluator.hpp
MatrixIO.cpp
MatrixIO.hpp
MshReader.cpp
MshReader.hpp
MshWriter.cpp
MshWriter.hpp
OBJReader.cpp
OBJReader.hpp
OBJWriter.cpp
OBJWriter.hpp
OutData.cpp
OutData.hpp
YamlToJson.cpp
YamlToJson.hpp
► mesh
► collision_proxy
CollisionProxy.cpp
CollisionProxy.hpp
UpsampleMesh.cpp
UpsampleMesh.hpp
► mesh2D
CMesh2D.cpp
CMesh2D.hpp
Mesh2D.cpp
Mesh2D.hpp
Navigation.cpp
Navigation.hpp
NCMesh2D.cpp
NCMesh2D.hpp
PolygonUtils.cpp
PolygonUtils.hpp
Refinement.cpp
Refinement.hpp
Singularities.cpp
Singularities.hpp
► mesh3D
CMesh3D.cpp
CMesh3D.hpp
Mesh3D.cpp
Mesh3D.hpp
Mesh3DStorage.hpp
MeshProcessing3D.cpp
MeshProcessing3D.hpp
Navigation3D.cpp
Navigation3D.hpp
NCMesh3D.cpp
NCMesh3D.hpp
► remesh
► wild_remesh
Collapse.cpp
Execute.cpp
LocalMesh.cpp
LocalMesh.hpp
LocalRelaxation.cpp
LocalRelaxationData.cpp
LocalRelaxationData.hpp
OperationCache.cpp
OperationCache.hpp
Smooth.cpp
Split.cpp
Swap.cpp
L2Projection.cpp
L2Projection.hpp
MMGRemesh.cpp
MMGRemesh.hpp
PhysicsRemesher.cpp
PhysicsRemesher.hpp
Remesher.cpp
Remesher.hpp
SizingFieldRemesher.cpp
SizingFieldRemesher.hpp
WildRemesher.cpp
WildRemesher.hpp
WildTetRemesher.cpp
WildTriRemesher.cpp
GeometryReader.cpp
GeometryReader.hpp
LocalBoundary.cpp
LocalBoundary.hpp
Mesh.cpp
Mesh.hpp
MeshNodes.cpp
MeshNodes.hpp
MeshUtils.cpp
MeshUtils.hpp
Obstacle.cpp
Obstacle.hpp
SlimSmooth.cpp
SlimSmooth.hpp
► problem
ElasticProblem.cpp
ElasticProblem.hpp
FrankeProblem.cpp
FrankeProblem.hpp
KernelProblem.cpp
KernelProblem.hpp
MiscProblem.cpp
MiscProblem.hpp
NodeProblem.cpp
NodeProblem.hpp
PointBasedProblem.cpp
PointBasedProblem.hpp
ProblemFactory.cpp
ProblemFactory.hpp
ProblemWithSolution.cpp
ProblemWithSolution.hpp
StokesProblem.cpp
StokesProblem.hpp
TestProblem.cpp
TestProblem.hpp
► quadrature
HexQuadrature.cpp
HexQuadrature.hpp
LineQuadrature.cpp
LineQuadrature.hpp
PolygonQuadrature.cpp
PolygonQuadrature.hpp
PolyhedronQuadrature.cpp
PolyhedronQuadrature.hpp
QuadQuadrature.cpp
QuadQuadrature.hpp
Quadrature.hpp
TetQuadrature.cpp
TetQuadrature.hpp
TriQuadrature.cpp
TriQuadrature.hpp
► refinement
APriori.cpp
APriori.hpp
► solver
► forms
► adjoint_forms
AdjointForm.cpp
AdjointForm.hpp
AMIPSForm.cpp
AMIPSForm.hpp
BarrierForms.cpp
BarrierForms.hpp
CompositeForm.cpp
CompositeForm.hpp
CompositeForms.cpp
CompositeForms.hpp
ParametrizationForm.cpp
ParametrizationForm.hpp
ParametrizedProductForm.hpp
SmoothingForms.cpp
SmoothingForms.hpp
SpatialIntegralForms.cpp
SpatialIntegralForms.hpp
SumCompositeForm.hpp
SurfaceTractionForms.cpp
SurfaceTractionForms.hpp
TargetForms.cpp
TargetForms.hpp
TransientForm.cpp
TransientForm.hpp
VariableToSimulation.cpp
VariableToSimulation.hpp
WeightedVolumeForm.cpp
WeightedVolumeForm.hpp
► lagrangian
AugmentedLagrangianForm.hpp
BCLagrangianForm.cpp
BCLagrangianForm.hpp
GenericLagrangianForm.cpp
GenericLagrangianForm.hpp
MacroStrainLagrangianForm.cpp
MacroStrainLagrangianForm.hpp
► parametrization
NodeCompositeParametrizations.cpp
NodeCompositeParametrizations.hpp
Parametrization.cpp
Parametrization.hpp
Parametrizations.cpp
Parametrizations.hpp
PeriodicMeshToMesh.cpp
PeriodicMeshToMesh.hpp
SplineParametrizations.cpp
SplineParametrizations.hpp
BodyForm.cpp
BodyForm.hpp
ContactForm.cpp
ContactForm.hpp
ElasticForm.cpp
ElasticForm.hpp
Form.hpp
FrictionForm.cpp
FrictionForm.hpp
InertiaForm.cpp
InertiaForm.hpp
InversionBarrierForm.cpp
InversionBarrierForm.hpp
L2ProjectionForm.cpp
L2ProjectionForm.hpp
LaggedRegForm.cpp
LaggedRegForm.hpp
PeriodicContactForm.cpp
PeriodicContactForm.hpp
PressureForm.cpp
PressureForm.hpp
RayleighDampingForm.cpp
RayleighDampingForm.hpp
► problems
StaticBoundaryNLProblem.hpp
AdjointNLProblem.cpp
AdjointNLProblem.hpp
AdjointTools.cpp
AdjointTools.hpp
ALSolver.cpp
ALSolver.hpp
DiffCache.hpp
FullNLProblem.cpp
FullNLProblem.hpp
NavierStokesSolver.cpp
NavierStokesSolver.hpp
NLHomoProblem.cpp
NLHomoProblem.hpp
NLProblem.cpp
NLProblem.hpp
OperatorSplittingSolver.cpp
OperatorSplittingSolver.hpp
Optimizations.cpp
Optimizations.hpp
SolveData.cpp
SolveData.hpp
TransientNavierStokesSolver.cpp
TransientNavierStokesSolver.hpp
► state
StateDiff.cpp
StateHomogenization.cpp
StateInit.cpp
StateLoad.cpp
StateOutput.cpp
StateRemesh.cpp
StateSolve.cpp
StateSolveLinear.cpp
StateSolveNavierStokes.cpp
StateSolveNonlinear.cpp
► time_integrator
BDF.cpp
BDF.hpp
ImplicitEuler.cpp
ImplicitEuler.hpp
ImplicitNewmark.cpp
ImplicitNewmark.hpp
ImplicitTimeIntegrator.cpp
ImplicitTimeIntegrator.hpp
► utils
► svd
ImplicitQRSVD.h
Tools.h
autodiff.h
AutodiffTypes.hpp
Bessel.hpp
BoundarySampler.cpp
BoundarySampler.hpp
BSplineParametrization.cpp
BSplineParametrization.hpp
ClipperUtils.cpp
ClipperUtils.hpp
CubicHermiteSplineParametrization.hpp
DisableWarnings.hpp
EdgeSampler.cpp
EdgeSampler.hpp
ElasticityUtils.cpp
ElasticityUtils.hpp
EnableWarnings.hpp
ExpressionValue.cpp
ExpressionValue.hpp
GeogramUtils.cpp
GeogramUtils.hpp
GeometryUtils.cpp
GeometryUtils.hpp
getRSS.c
getRSS.h
HashUtils.hpp
IntegrableFunctional.cpp
IntegrableFunctional.hpp
InterpolatedFunction.cpp
InterpolatedFunction.hpp
Interpolation.cpp
Interpolation.hpp
Jacobian.cpp
Jacobian.hpp
JSONUtils.cpp
JSONUtils.hpp
LazyCubicInterpolator.cpp
LazyCubicInterpolator.hpp
Logger.cpp
Logger.hpp
MatrixCache.cpp
MatrixCache.hpp
MatrixUtils.cpp
MatrixUtils.hpp
MaybeParallelFor.hpp
MaybeParallelFor.tpp
par_for.cpp
par_for.hpp
raster.cpp
raster.hpp
RBFInterpolation.cpp
RBFInterpolation.hpp
RefElementSampler.cpp
RefElementSampler.hpp
Selection.cpp
Selection.hpp
StringUtils.cpp
StringUtils.hpp
svd.hpp
Timer.hpp
Types.hpp
Common.hpp
main.cpp
OptState.cpp
OptState.hpp
State.cpp
State.hpp
Units.cpp
Units.hpp